Hot off the Press

'Hot off the Press' is a daily listing of the most recent articles in epigenetics and imprinting, collected from the PubMed database and sorted by the date added to PubMed (not necessarily by official publication date). You can also suscribe to an RSS feed.

• Applications of carbon dot-mediated transformation in plant (epi)genomic studies
  She L, Cheng X, Tavakoli M, Borovskii G, Zhang W, Huang J
  Trends Plant Sci (Mar 2025)
• FDPSM: Feature-Driven Prediction Modeling of Pathogenic Synonymous Mutations
  Jin F, Cheng N, Wang L, Ye B, Xia J
  J Chem Inf Model (Mar 2025)
• Long non coding RNA function in epigenetic memory with a particular emphasis on genomic imprinting and X chromosome inactivation
  Le LTT
  Gene (Apr 2025)
• NONO interacts with nuclear PKM2 and directs histone H3 phosphorylation to promote triple-negative breast cancer metastasis
  Li Q, Ci H, Zhao P, Yang D, Zou Y, Chen P, Wu D, Shangguan W, Li W, Meng X, Xing M, Chen Y, Zhang M, Chen B, Kong L, Zen K, Huang DCS, Jiang ZW, Zhao Q
  J Exp Clin Cancer Res (Mar 2025)
• Reframing Formalin: A Molecular Opportunity Enabling Historical Epigenomics and Retrospective Gene Expression Studies
  Holleley CE, Hahn EE
  Mol Ecol Resour (Apr 2025)
• Endothelial transcriptomic, epigenomic and proteomic data challenge the proposed role for TSAd in vascular permeability
  Brash JT, Diez-Pinel G, Rinaldi L, Castellan RFP, Fantin A, Ruhrberg C
  Angiogenesis (Mar 2025)
• Rare Causes and Differential Diagnosis in Patients With Silver-Russell Syndrome
  Braga BL, da Cunha Scalco R, Homma TK, Freire BL, Cellin LP, Canton APM, Lerario AM, de Assis Funari MF, de Souza V, Bertola DR, Malaquias AC, Mendonca BB, de Lima Jorge AA
  Clin Genet (Apr 2025)
• Tracking and mitigating imprint erasure during induction of naive human pluripotency at single-cell resolution
  Fischer LA, Meyer B, Reyes M, Zemke JE, Harrison JK, Park KM, Wang T, Jüppner H, Dietmann S, Theunissen TW
  Stem Cell Reports (Mar 2025)
• Unraveling the intricate molecular landscape and potential biomarkers in lung adenocarcinoma through integrative epigenomic and transcriptomic profiling
  Mukherjee A, Boonbangyang M, K S M
  Sci Rep (Mar 2025)
• Host-microbe multi-omics and succinotype profiling have prognostic value for future relapse in patients with inflammatory bowel disease
  O'Sullivan J, Patel S, Leventhal GE, Fitzgerald RS, Laserna-Mendieta EJ, Huseyin CE, Konstantinidou N, Rutherford E, Lavelle A, Dabbagh K, DeSantis TZ, Shanahan F, Temko A, Iwai S, Claesson MJ
  Gut Microbes (Dec 2025)
• Semi-automated IT-scATAC-seq profiles cell-specific chromatin accessibility in differentiation and peripheral blood populations
  Jin W, Ma J, Rong L, Huang S, Li T, Jin G, Zhou Z
  Nat Commun (Mar 2025)
• Advances in molecular epidemiology of diabetic retinopathy: from genomics to gut microbiomics
  Huang Y, Rao S, Sun X, Liu J
  Mol Biol Rep (Mar 2025)
• Distinguishing Genetic Alterations Versus (Epi)Mutations in Silver-Russell Syndrome and Focus on the IGF1R Gene
  Vimercati A, Tannorella P, Guzzetti S, Calzari L, Gentilini D, Manfredini E, Gori G, Gaudino R, Antona V, Piccione M, Daolio C, Auricchio R, Sirchia F, Minelli A, Rossi E, Bellini M, Biasucci G, Raucci AR, Pozzobon G, Patti G, Napoli F, Larizza L, Maghnie M, Russo S
  J Clin Endocrinol Metab (Mar 2025)
• Phosphatase PHLPP1 is an alveolar-macrophage-intrinsic transcriptional checkpoint controlling pulmonary fibrosis
  Jiang Y, Zhang Y, Wang X, Xiang Y, Wang Z, Wang B, Ding Y, Gao Y, Rui B, Bai J, Ding Y, Chen C, Zhan Z, Liu X
  Cell Rep (Mar 2025)
• Extensive epigenomic dysregulation is a hallmark of homologous recombination deficiency in triple-negative breast cancer
  Chen Y, Salas LA, Marotti JD, Jenkins NP, Cheng C, Miller TW, Kettenbach AN, Christensen BC
  Int J Cancer (Mar 2025)
• Atlas of imprinted and allele-specific DNA methylation in the human body
  Rosenski J, Peretz A, Magenheim J, Loyfer N, Shemer R, Glaser B, Dor Y, Kaplan T
  Nat Commun (Mar 2025)
• Long read sequencing enhances pathogenic and novel variation discovery in patients with rare diseases
  Sinha S, Rabea F, Ramaswamy S, Chekroun I, El Naofal M, Jain R, Alfalasi R, Halabi N, Yaslam S, Sheikh Hassani M, Shenbagam S, Taylor A, Uddin M, Almarri MA, Du Plessis S, Alsheikh-Ali A, Abou Tayoun A
  Nat Commun (Mar 2025)
• RNA Modification in Metabolism
  Liu Y, Sun Z, Gui D, Zhao Y, Xu Y
  MedComm (2020) (Mar 2025)
• Programmable mRNA therapeutics for controlled epigenomic modulation of single and multiplexed gene expression in diverse diseases
  O'Donnell CW, Farelli JD, Belaghzal H, Chen J, Beech L, Sullivan J, Morrison-Smith C, Siecinski S, Katz A, Mildrum S, Gurnani M, Dhanania P, Webb CR, Castello Coatti G, Rumale P, Costa DFG, Gibson MI, Wang YE, Newman JV, McCauley TG
  Nat Commun (Mar 2025)
• Application of Spatial Omics in the Cardiovascular System
  Hu Y, Jia H, Cui H, Song J
  Research (Wash D C) (2025)

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